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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788565.1_cds_XP_016468940.1_571
CDS Infomation

[gene=LOC107791314] [db_xref=GeneID:107791314] [protein=probable protein phosphatase 2C 11 isoform X2] [protein_id=XP_016468940.1] [location=complement(join(14422..14550,15366..15437,18135..18226,18796..18882,22282..22440,22535..22633,22807..22949,24457..24668))] [gbkey=CDS]
Sequence

ATGATGAACGTTGACAAGAAAGAATCCGATCGTAACCTTCCAGAACTTTCTCCACCGTCC
GTGGAGAACCATCCGCCGGCACCGGCAGCGACCCCGTCACGGCAACCACTGAAAGAGCCC
ACTGCGCCACCGCAGATGAAACAGACGCCGTCAACAACTGTCATGATTCCTTCTATTGAT
CCCAATGCCCTCTTTAGCGGCGGCGGTATTAGCTTTCTGACTGGAAACAAAAGTGCTAAG
TTCAGCTACGGATATGCTAGTTTTAAGGGGAAACGGGCTTCTATGGAGGACTTTTATGAG
ACAAGGATATCAGAAGTCGATGGTCAAATGGTGGCATTCTTTGGTGTTTTTGATGGTCAC
GGTGGTTCAAGAACAGCAGAATACCTGAAGAACAACCTCTTTAAGAATTTGAGTGGTCAT
CCTGATTTTATCAAAGATACGAAGTCAGCTATAGTTGAAGCATTTAAGCAAACCGACGCC
GATTACCTTAATGAAGAAAAAGGCCAGCAAAAAGATGCTGGTTCAACAGCATCAACTGCT
GTTCTTTTAGGTGATAGATTGGTTGTTGCAAATGTGGGAGACTCTAGAGTCGTCGCTTGT
AGAGATGGCTCAGCTATTCCTTTGTCCATCGATCACAAGCCTGACAGATCTGATGAGCGT
GAAAGGATAGAACAGGCTGGCGGTTTCATCATCTGGGCAGGTACATGGCGTGTAGGTGGG
GTCCTGGCTGTTTCTCGTGCATTTGGAGATAAACTGCTAAAGCCATATGTTGTGGCAGAC
CCAGAGATTCAGGAAGAAGAAATTGATGGTGTAGATTTTATCATAATTGCAAGTGATGGA
CTTTGGAATGTCCTGTCTAACAAGGATGCTGTGGCCATCGTGCAGGACATAAAAGATGCT
GAAGCAGCATCACGTAAGCTTATAGAAGAAGCTTATTCAAGGGGGAGTTCTGACAACATC
ACATGTGTAGTTGTTCGATTTGAGAGCGCATGA

Peptide Sequence

PEP ID

XP_016468940.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 11 isoform X2 [Nicotiana tabacum]
Sequence

MMNVDKKESDRNLPELSPPSVENHPPAPAATPSRQPLKEPTAPPQMKQTPSTTVMIPSID
PNALFSGGGISFLTGNKSAKFSYGYASFKGKRASMEDFYETRISEVDGQMVAFFGVFDGH
GGSRTAEYLKNNLFKNLSGHPDFIKDTKSAIVEAFKQTDADYLNEEKGQQKDAGSTASTA
VLLGDRLVVANVGDSRVVACRDGSAIPLSIDHKPDRSDERERIEQAGGFIIWAGTWRVGG
VLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVLSNKDAVAIVQDIKDA
EAASRKLIEEAYSRGSSDNITCVVVRFESA

Transcript Sequence

Gene sequence data has not been registered.